Enhanced activity of Candida antarctica lipase B in cholinium aminoate ionic liquids: a combined experimental and computational analysis
Source
Journal of Biomolecular Structure and Dynamics
ISSN
07391102
Date Issued
2024-01-01
Author(s)
Chan, Kam Khong
Sundaram, Vidya
Tan, Jully
Ho, Yong Kuen
Ramanan, Ramakrishnan Nagasundara
Ooi, Chien Wei
Abstract
As a class of ionic liquids with higher biocompatibility, cholinium aminoates ([Cho][AA]) hold potential as solvation media for enzymatic bioprocessing. Herein, solvation effect of [Cho][AA] on structural stability and enzymatic activity of Candida antarctica lipase B (CALB) was evaluated using experimental and computational approaches. Influence of [Cho][AA] on CALB stability was investigated using amino acid anions ([AA]<sup>-</sup>) with varying hydrophobicity levels. Choline phenylalaninate ([Cho][Phe]) resulted in 109.1% and 110.4% of relative CALB activity to buffer medium at 25 °C and 50 °C, respectively. Simulation results revealed the improvement of CALB’s enzymatic activities by [AA]<sup>-</sup> with a strong hydrophobic character. Shielding of CALB from water molecules by [AA]<sup>-</sup> was observed. The level of CALB activity was governed by accumulation level of [AA]<sup>-</sup> at CALB’s first hydration layer. The stronger interaction between His224 and Asp187 was postulated to be driven by [Cho][AA], resulting in the activity enhancement of CALB. The slight improvement of CALB activity in 0.05 M [Cho][Phe] at 50 °C could be due to the larger size of entrance to the catalytic site and the stronger interaction between the catalytic residues. The promising effect of [Cho][Phe] on CALB activation may stimulate research efforts in designing a ‘fully green’ bioreaction for various industrial applications. Communicated by Ramaswamy H. Sarma.
Subjects
CALB | choline phenylalaninate | conformational changes | enzyme activation | molecular dynamic simulation
